CDS
| Accession Number | TCMCG053C00390 |
| gbkey | CDS |
| Protein Id | XP_034207149.1 |
| Location | complement(join(2497660..2497782,2497938..2498036,2498135..2498206,2498300..2498903,2498991..2499103,2499286..2499385,2499484..2499606,2499729..2499796,2500045..2500197,2500311..2500454,2500663..2500854,2500980..2501064,2501220..2501371,2501473..2501622,2502117..2502170,2502298..2502433,2502533..2502666,2502813..2503949)) |
| Gene | LOC117620998 |
| GeneID | 117620998 |
| Organism | Prunus dulcis |
Protein
| Length | 1212aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA631757 |
| db_source | XM_034351258.1 |
| Definition | DNA repair protein RAD5B [Prunus dulcis] |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15505
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0009507 [VIEW IN EMBL-EBI] GO:0009526 [VIEW IN EMBL-EBI] GO:0009536 [VIEW IN EMBL-EBI] GO:0009941 [VIEW IN EMBL-EBI] GO:0031967 [VIEW IN EMBL-EBI] GO:0031975 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044434 [VIEW IN EMBL-EBI] GO:0044435 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGACCCCAGAAACGGCGCAGAGGAAGAGAAAGTCTCATCAGTTGAAATTCCCAAATTTGATATTCTCCCAGAGATCTCGCAATGCGGTGAGGCCAACAACTCCAACTTTGAAATTCCTACGGCGGTGATTGTTAAGCGAACCAATACGAGCACTGGGGCTCGTATTTCAGCCCCGATCAATCAAGAGGGCTCCAAGGCTGCAGATGAAGCCGAAGCTCAGAGATTAGTGAAGGAAGAAGTTCCTGATAGTCAAGAGGGTTTGGTAACTTTGGCTCAACTGCCGGATCCTACGTCCACCCATATCAAGCAAGAGAGCTCCGAGAAGTCAGATAGGGCTGAAACTCTTTCTGGGTTGAACCCTCCAAGCTTGGTTAAGATTGAGGTTCCTGATAGCCAGGAGGGTTTGATTCAGCAGGCAAAACCTGTTCCAATTCGGGTCAAGCAAGAGCCCTTTGTGGAGTCAGATGAGGCCAATCCTCTAAGCTTAGTACCGAGTCAGGTTCCTGATAGTCAAGAGGGTTTGGTCCTACGAGTGGAACCCATTACGACCCTGGTTAAGCTGGAGGCCTCTGAGGAGGCAGATGAAGCCGAAAAGCTTCACGGGTCTAAGCCTGAGCGCCCAGAAAAGAAGGAAGTTCCTGATCAGCAAGAGGGTCTGACCCAACAGGAAGAGAATGTCAAGAAAATCCGAGCAGTTGTGGGGTCTGAAATATCTGAACTTTTAATTCAACTAGTACTCTCTCGATGCGGTGACAACCCAGATGCAGCCATCAATTACATCCTTGAAGGTCAGGGGATATCGGTTAAGCCGACAAATACGAGCACAGGAGCTTGTATCTCAACCCAGTTGCCCGATTCGCATAAGGGATCGAAGCCTAATAGCCAGGTAAAGAAGGAAGATCCTGATTGTCAAGTAACTTCGGTTCAACAGACGAGGCCTAAAAATTTGGAGGATGGAGACTTCCCCACAGAGCAGGATTGGCTTTTGGTGGGAAGAACATTTGTCACTGCACTTTCTACTTCCAAAGGCAGGAAATTGTTTGATAATGAGATTGTTCATTTCTCTTTTCCTTCCGCAAACTCCAGCCACAAAACCAGATGGATTGTTCGTTTCTCAACCAAGCAATTTGGAGAGATTGGTCGGCTTCCCATGGAATGGGCAAAGTGTGTTATTCCGCTTGTAAATTCTGGTAAAGTTAAACTTCGTGGGCGTTGTATAGCTGCACCGAAAGTCCTTTCTATGATGCAAGAGGTCATATTGTATGTAAGTTTTTATATTCACCACTCAATTTTCACGGAGGGTGACCACTCGTCGTGGAGGCTAGATGTATCCCCCAACATTGATTCTTCAATTTATCCTCTCCTCAGTCAGTTCAAATTGCTGAAAATTCAGCCATATAAGAAGGCTGAATTCACCCCAGAAGAACTTGATTCCCGGAAACGCCTTTTGAATATTGAACGTATCCCAGATGACGGTGCTCCTGTGTTGCCCTTAGTGAAACGAAGAAAGGGTTGCCAACAGCCTTCAGAAGAAAGCAGAGATGAACAAGCCATTACAGAGTCATCTCTAAATAAGATTGTTGGTGCAGCAGATGTTTATGACTTGGAGGAGATGGAACCCCCGAGTACTCTCACGTGTGTTCTGAAACCATACCAGAAACAAGCTCTCTACTGGATGTCTGAATTAGAGAAGGGAATTGATGTTGAGAAGGCAACACAAACTCTTCATCCTTGCTGGGCGGCCTATCATATGTGTGATGAGAGGGTTTCTTCAGTCTATGTGAACATCTTCACGGGAGAGGCAACCACAAAATTTCCAACTGCAACACAGATGGCAAGAGGAGGAATCCTAGCAGATGCAATGGGACTTGGGAAGACTGTGATGACAATTGCTCTAATACTTGCAAGACCAGGCAGAAGCTCTAATAGTATTGAAATTGCAAAGAGGAGGAGGATAGATTCAGATACAAGCACCCCATTTAAACCAAGGGGAGGCACTCTTGTTGTCTGTCCCATGTCTTTGTTAAGCCAGTGGAAGGATGAGCTTGAAACCCATTCAGAGTCGGAAAGCATTTCCATTTTTGTTCACTATGGTGGATACAGATCCACTGACCCCAAGGTGATATCAGTACAAGATGTAGTCTTGACAACATATGGTGTCTTGTCTACATCTTATAAAAGTGATGGGGAGAACAGCATTTTCCACCAGATCGACTGGTATAGGGTGGTGCTTGATGAAGCACATAGCATTAAATCTTCAAAGACCCAAGTTGCTCAGGCTGCTTTTGCCTTGTCCTCCCATTGTCGATGGTGTTTGACAGGAACGCCTATTCAGAATAATTTGGAAGACCTCTACAGCCTCTTATGCTTCTTGCATGTTGAACCATGGTGCAACTGGGCATGGTGGAGTAAATTAATTCAACGACCTTATGAGAGTGGTGACCCTAGAGGACTGAGATTGATAAAGGCTATTTTGAGGTCATTAATGTTAAGAAGAACAAAGGAGACAAAGGATAAAAAAGGAAGGCCCATACTTGTTCTCCCTCCAACTGACATTCAAACCATTGAGTGTGAACAGTCAGAAGCTGAACGCTACTTTTATGATGCCCTTTTTAGGAGATCAAAAGTCCAGTTTGATCAGTTTGTGGCACAAGGCAAGGTTCTTCACAACTATGCAAATATCCTTGAGCTACTACTCCGATTGAGGCAGTGTTGCAACCACCCATATCTTGTGATGAGTAGCGCTGATTCACAAAAGATAAAAAGTGGGAGTGATCCCCAAAAGTTTGCAGACTTGGACGAGCTTGCTAGAAGATTCCTTGAGGCTAATCGTGATGCTTCCACTTCAAAGCAGATTGTCCCCACCCAAGCCTATGTTGAAGAGGTTGTTGAGAGTATACGTCGGGGTGAAAACAAAGAGTGTCCCATATGCTTGGAGCTTGCAGATGATCCTGTACTTACACCATGCGCGCATAAGATGTGCAGGGAGTGTCTTCTCTCAAGCTGGCAGACACCAGCTACTGGTCGATGTCCAATATGTCGGCAATGGCTCAAATACACTGACCTTATAGCCTGCCCATCAGAAAGCCGTTTCCAGGCTAATACTGAGGGAAATTGGACGGAATCTTCAAAGGTTTTAAAGCTCTTGGATTGCTTGGAACATATCCTTCGGTCAGATTCTGGTGCAAAGAGCATTGTTTTCAGTCAGTGGACTGCATTTTTGGATCTCTTGGAGACCCCTATGAAGAAAAGAGGAATTGGGTTTCTGAGGTTTGATGGAAAGCTGTCCCAGACACAGAGAGAAAGGGTATTGAACGAGTTCAATGAGACCAGGCAGAAGATGGTGTTGTTGACGTCTTTGAAAACTGGTGGTGTTGGTCTAAATTTAACTGCAGCATCTAATGTCTTTATAATGGATCCATGGTGGAATCCAGCGGTTGAGGAGCAAGCAATAATGAGAATTCATCGCATTGGACAAAAGCGAACTGTTGTTGTTAGAAGATTTATTGTCAAGGACTCAGTGGAGGAACGCATGCAACAAGTTCAGGCCAGGAAGCAAAAAATGATTGCTGGAGCTCTCACTGATGAGGAAGTAAGATCTGCCAGAATTGAGGAGCTCAAAATGCTTTTCACATAG |
| Protein: MDPRNGAEEEKVSSVEIPKFDILPEISQCGEANNSNFEIPTAVIVKRTNTSTGARISAPINQEGSKAADEAEAQRLVKEEVPDSQEGLVTLAQLPDPTSTHIKQESSEKSDRAETLSGLNPPSLVKIEVPDSQEGLIQQAKPVPIRVKQEPFVESDEANPLSLVPSQVPDSQEGLVLRVEPITTLVKLEASEEADEAEKLHGSKPERPEKKEVPDQQEGLTQQEENVKKIRAVVGSEISELLIQLVLSRCGDNPDAAINYILEGQGISVKPTNTSTGACISTQLPDSHKGSKPNSQVKKEDPDCQVTSVQQTRPKNLEDGDFPTEQDWLLVGRTFVTALSTSKGRKLFDNEIVHFSFPSANSSHKTRWIVRFSTKQFGEIGRLPMEWAKCVIPLVNSGKVKLRGRCIAAPKVLSMMQEVILYVSFYIHHSIFTEGDHSSWRLDVSPNIDSSIYPLLSQFKLLKIQPYKKAEFTPEELDSRKRLLNIERIPDDGAPVLPLVKRRKGCQQPSEESRDEQAITESSLNKIVGAADVYDLEEMEPPSTLTCVLKPYQKQALYWMSELEKGIDVEKATQTLHPCWAAYHMCDERVSSVYVNIFTGEATTKFPTATQMARGGILADAMGLGKTVMTIALILARPGRSSNSIEIAKRRRIDSDTSTPFKPRGGTLVVCPMSLLSQWKDELETHSESESISIFVHYGGYRSTDPKVISVQDVVLTTYGVLSTSYKSDGENSIFHQIDWYRVVLDEAHSIKSSKTQVAQAAFALSSHCRWCLTGTPIQNNLEDLYSLLCFLHVEPWCNWAWWSKLIQRPYESGDPRGLRLIKAILRSLMLRRTKETKDKKGRPILVLPPTDIQTIECEQSEAERYFYDALFRRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMSSADSQKIKSGSDPQKFADLDELARRFLEANRDASTSKQIVPTQAYVEEVVESIRRGENKECPICLELADDPVLTPCAHKMCRECLLSSWQTPATGRCPICRQWLKYTDLIACPSESRFQANTEGNWTESSKVLKLLDCLEHILRSDSGAKSIVFSQWTAFLDLLETPMKKRGIGFLRFDGKLSQTQRERVLNEFNETRQKMVLLTSLKTGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVVVRRFIVKDSVEERMQQVQARKQKMIAGALTDEEVRSARIEELKMLFT |